List of Data Blocks ------------------- Data Block 0 ~~~~~~~~~~~~ Defines the data format for Collection "Overlay Header". Field Types: 16, 100, 101, 102 Possible Data Items and their Regions: - OverlaySave - eType - color - where - parentIndex - start - end - startArrow - endArrow - rotationAngle - orientation - runs - alignment - bkgColor - bTransparentBkg - volumeDataPtr - lassoPtr - OverImgloc - x - y - OverImgbox - first - last - OverlaySaveArray - array - avail - used - regressionType - OverTextRun - string - font - fontFace - fontSize - color - scriptStyle - isBold - isItalic - isUnderlined - OverTextRunArray - array - avail - used - OverVolumeData - sumTotal - sumBorders - numPixels - numPixelsBorders - minPixelValue - maxPixelValue - stdDeviation - concentration - type - hasUserLabel - string - overlaySavePtr - OverLasso - start - bounds - nsteps - swused - swavail - steps - integden - pixcnt - maxpix - minpix Data Block 1 ~~~~~~~~~~~~ Actual data for Collection "Overlay Header". See Data Block 0 for details on possible types of data. Data Block 2 ~~~~~~~~~~~~ Defines the data format for Collection "Q1 Description". Field Types: 16, 100, 101, 102 Possible Data Items and their Regions: - Gel - file\_ver - stripe - notes - nt\_used - nt\_avail - stdname - stdunits - stdtype - blotrows - blotcols - smplwidth - bkgden - bkgtype - calcflags - nbacklog - backlog - tdisp\_md - lbkg\_md - lbkg\_disk - lbkg\_window - sensitivity - min\_peak - noise\_filter - shoulder\_sens - size\_scale - normalize - use\_bandlimit - shadow - lbkg\_flags - bandlimit - tolerance - match\_flags - qcused - qcavail - calcurves - qtyunits - vntr\_ambig - flank - repeat - vntr\_flags - sim\_flags - sim\_tolerance - sim\_required - asl\_used - asl\_avail - as\_links - allele\_set\_code - db\_name - db\_path - db\_filename - db\_id - mod\_time - taglist - db\_gelnum - db\_unit - mobilmap - db\_update - db\_type - adb\_gelnum - adb\_unit - adb\_taglist - flags - bstyle - difdsp - lanes - lnused - lnavail - nxties - nyties - nties - ties - Stripe - dens - denused - denavail - bkgbox - minimum - average - maximum - Lane - name - nyties - crossings - segtrace - segused - segavail - bands - bandused - bandavail - gpk - gaussused - gaussavail - dentrace - stdlanenum - right\_stdlanenum - right\_frac - smplwidth - lanenum - flags - calcflags - sumden - sumd\_bands - lbkg\_disk - lbkg\_window - lbkg\_flags - dtparm - db\_sample - db\_band\_set - db\_standard - dmt\_used - dmt\_avail - db\_mobil - db\_bset\_flags - adb\_band\_set - adb\_sample - lbkg\_md - Lane Pointer - lane pointer - Trace - dvused - dvavail - dvals - srcstrace - navg - min - max - avg - bkdvals - gaussdvused - gaussdvavail - gaussdvals - Tdiag - diag - xaxis - yaxis - data - srctrace - dsttrace - lanenum - datawidth - firstden - max - Band - name - sumden - rf - stdval - quality - norm\_den - calnum - qty - this - first - peak - last - maxpix - minpix - lasso - db\_btp\_code - db\_btp\_flags - adb\_btp\_code - adb\_btp\_flags - stdsource - flags - qtysource - Band Pointer - band pointer - Lasso - start - bounds - nsteps - swused - swavail - steps - integden - pixcnt - maxpix - minpix - Band Link - lanenum - Bandnum - Imgloc - x - y - Imgbox - first - last - Band Pointer - unowned band pointer - Calcurve - name - desc - from - cbused - cbavail - calbands - ninterp - intps - slope - intercept - corr\_coef - calnum - mcode - model - extrapolate - status - type - named - Calcurve Pointer - calcurve pointer - Calband - band - measure - qty - reldev - dilution - dilution\_txt - qtysource - relstat - Calintp - measure - qty - Crosstie - left - ax - Crdloc - x - y - Stretcloc - a - r - MobilTie - rf - mobility - bst\_idx - btp\_code - AlleleSetLink - name - id\_safety - allele\_set - als\_item - UserDetect - sensitivity - min\_peak - noise\_filter - shoulder\_sens - size\_scale - normalize - use\_bandlimit - shadow - bandlimit - BackLog - type - minden - maxden - Note - head - tail - text\_start - text - flags - tag - pr\_code - vl\_code - taglist - used - avail - tags - StandardTie - std - mobility - MobilMap - lanenum - used - stdties - DifDsp Layout - mode - ratio - differ - GaussPeak - center - sigma - height - gauerr - lolim - hilim - GaussPeak Pointer - gspk pointer Data Block 3 ~~~~~~~~~~~~ Actual data for Collection "Q1 Description". See Data Block 2 for details on possible types of data. Data Block 4 ~~~~~~~~~~~~ Defines the data format for Collection "DDB Description". Field Types: 16, 100, 101, 102 Possible Data Items and their Regions: - tag - pr\_code - vl\_code - taglist - used - avail - tags - tag\_value - references - decode - tagdef - prompt - references - used - avail - values - tagdef\_list - used - avail - tagdefs - band - quality - std\_value - norm\_den - btp\_code - flags - peak - lane - bands\_used - bands\_avail - bands - sample\_code - bst\_code - flags - dentrace - dmt\_used - dmt\_avail - db\_mobil - gel - path - filename - id - name - description - cre\_time - mod\_time - update - lanes\_used - lanes\_avail - lanes - taglist - mobilmap - lanewidth - detection - unit - gidx - stdtype - lbkg\_md - lbkg\_disk - lbkg\_status - layout - gel pointer - gel pointer - sample - name - cre\_time - description - taglist - idx\_used - idx\_avail - indices - flags - sample pointer - sample pointer - band\_type - name - btp\_code - index - gidx - lanenum - low\_std - ideal\_std - high\_std - low\_sf - ideal\_sf - high\_sf - band set - name - cre\_time - mod\_time - idx\_used - idx\_avail - index - comment - id - tolerance - bst\_idx - bt\_used - bt\_avail - bt\_valid - band\_types - taglist - tagdefs - unit - norm\_btp\_code - gidx - lanenum - method - modified - code\_style - display\_names - report\_names - type - unit\_change - model\_vers - band set pointer - band set pointer - base - name - description - cre\_time - mod\_time - id - pathname - gels\_used - gels\_avail - gels - gel\_sorting - gel\_sort\_tag - gel\_count - gtpl\_used - gtpl\_avail - gtpl\_count - gel\_templates - smpl\_used - smpl\_avail - samples - sample\_sorting - sample\_count - bst\_used - bst\_avail - band\_sets - bst\_sorting - bst\_count - srch\_used - srch\_avail - srch\_count - searches - tagdef\_list - layouts - units\_used - units\_avail - units - pop\_used - pop\_avail - pop\_count - pop\_links - seg\_map - db\_type - layouts - sum - gel\_list - sample\_detail - sample\_list - gel\_detail - bset - srch - odrep - dbp - difdsp - detect - gel\_list\_layout - sel\_name - sel\_date\_from - sel\_date\_to - sel\_tag1 - sel\_tag2 - sort\_by - lst\_pr\_code - dbpos - sample\_detail\_layout - tagdefs - dbpos - sample\_list\_layout - sel\_tagdef1 - sel\_tagdef2 - lst\_tagdef1 - lst\_tagdef2 - sort\_by - dbpos - geldet\_layout - gel\_tagdef1 - gel\_tagdef2 - sample\_tagdef1 - sample\_tagdef2 - sort\_by - flags - dbpos - bset\_layout - unit - tagdefs - default\_bset - lg\_dbpos - sm\_dbpos - unit - longname - shortname - unitname - interp - order - flags - unit pointer - unit pointer - reference lane - gidx - lanenum - bst\_idx - search - name - smplname - date\_from - date\_to - taglist - tagdefs - match - ref\_smpl - match\_percent - nlanes - ref\_lanes - srchnum - search\_by - compare - sim\_method - weighting - edited - include - useGaussModelsIfPresent - search pointer - search pointer - search layout - match\_percent - srchnum - tagdefs - sim\_method - include - weighting - dbpos - lane index - gidx - lanenum - bst\_idx - pop link - name - plidx - dir\_block - data\_block - pop link pointer - poplink pointer - segment map - first - nsegs - segs - dbp\_pr\_coldata\_fields - type - value - pr layout - ref\_lnum - cols\_used - coldata - flags - font - sum layout - style - lg\_dbpos - sm\_dbpos - imgloc - x - y - imgres - x - y - ddb position - loc - size - flags - dbp ptree layout - dp\_pos - method - dbp pca layout - dp\_pos - dbp popfrm layout - dp\_pos - dbp layouts - popfrm - pr - ptree - pca - irp - irp layout - cols\_used - coldata - ref - order - active - style - pg\_layout - show\_btypes - ruler - ref\_lnum - odrep layout - od\_types - mobilmap - lanenum - used - stdties - standardtie - std - mobility - DifDsp Layout - mode - ratio - differ - detect layout - userdet - screenloc - lane\_width - manual - style - valid - userdetect - sensitivity - min\_peak - noise\_filter - shoulder\_sens - size\_scale - normalize - use\_bandlimit - shadow - bandlimit - dentrace - dvused - dvavail - dvals - srctrace - navg - min - max - avg - bkdvals - gaussdvused - gaussdvavail - gaussdvals - gaussmax - gaussmin - imgbox - first - last - db\_mobil. - rf - mobility - bst\_idx - btp\_code Data Block 5 ~~~~~~~~~~~~ Actual data for Collection "DDB Description". See Data Block 4 for details on possible types of data. Data Block 6 ~~~~~~~~~~~~ Defines the data format for Collection "Audit Trail". Field Types: 16, 100, 101, 102 Possible Data Items and their Regions: - AuditTrail - m\_entries - m\_userPool - m\_descPool - m\_appPool - AuditTrailEntry - m\_time - m\_user - m\_description - m\_details - m\_detailX1 - m\_detailY1 - m\_detailX2 - m\_detailY2 - m\_version - m\_comment - m\_filter - m\_locked - AuditTrailEntryPtr - AuditTrailEntryPtr - AuditTrailEntryPtrVector - m\_mmvectorList - m\_mmvectorUsed - m\_mmvectorAvail - AuditTrailStringPool - m\_pool - AuditTrailStringVector - m\_mmvectorList - m\_mmvectorUsed - m\_mmvectorAvail - Imgloc - x - y - Imgres - x - y - Imgbox - first - last - Crdloc - x - y - Crdres - x - y - Crdbox - first - last - Crdscale - x - y - ImgState - mincon - maxcon - in - out - low\_frac - high\_frac - state - gamma - aspect - Savemap - center - scale - CRealPoint - m\_x - m\_y - CRealSize - m\_width - m\_height - CRealDistance - m\_x - m\_y - CRealLine - m\_start - m\_end - CRealRect - m\_top - m\_left - m\_right - m\_bottom - CImagePoint - m\_x - m\_y - CImageSize - m\_width - m\_height - CImageDistance - m\_x - m\_y - CImageLine - m\_start - m\_end - CImageRect - m\_top - m\_left - m\_right - m\_bottom - CWindowPoint - m\_x - m\_y - CWindowSize - m\_width - m\_height - CWindowDistance - m\_x - m\_y - CWindowLine - m\_start - m\_end - CWindowRect - m\_top - m\_left - m\_right - m\_bottom - sm\_string - m\_buffer - m\_length - mm\_string - m\_buffer - m\_length Data Block 7 ~~~~~~~~~~~~ Actual data for Collection "Audit Trail". See Data Block 6 for details on possible types of data. Data Block 8 ~~~~~~~~~~~~ Defines the data format for Collection "Scan Header". Field Types: 16, 100, 101, 102 Possible Data Items and their Regions: - SCN - filevers - creation\_date - last\_use\_date - user\_id - prog\_name - scanner - old\_description - old\_comment - desc - pH\_orient - Mr\_orient - nxpix - nypix - data\_fmt - bytes\_per\_pix - endian - max\_OD - pix\_at\_max\_OD - img\_size\_x - img\_size\_y - min\_pix - max\_pix - mean\_pix - data\_ceiling - data\_floor - cal - formula - imgstate - qinf - params - history - color - light\_mode - size\_mode - norm\_pix - bkgd\_pix - faint\_loc - small\_loc - large\_box - bkgd\_box - dtct\_parm\_name - m\_id32 - m\_scnId - m\_imagePK - ScnCalibInfo - calfmt - dettyp - isotop - gel\_run\_date - cnts\_loaded - xpo\_start\_date - xpo\_length - ScnFormula - type - units - c\_pro - c\_exp - ScnImgloc - x - y - ScnImgbox - first - last - ScnImgState - mincon - maxcon - in - out - low\_frac - high\_frac - state - gamma - aspect - ScnQtyInfo - qty\_range - qty\_units - blackIsZero - scanner\_maxpix - scanner\_units - scanner\_bias - scanner\_maxqty - calstep\_count - calstep\_raw - calstep\_qty - calstep\_qty\_offset - gray\_response\_data - gray\_response\_len - gray\_response\_factor - ScnCrdloc - x - y - ScnCrdres - x - y - ScnCrdbox - first - last - ScnParams - resolution - scan\_area - exposure\_time - ref\_bkg\_time - gain\_setting - light\_mode - color - intf\_type - size\_mode - imaging\_mode - filter\_name1 - filter\_name2 - filter\_name3 - filter\_name4 - filter\_name5 - filter\_id1 - filter\_id2 - filter\_id3 - filter\_id4 - filter\_id5 - laser\_name1 - laser\_name2 - laser\_name3 - laser\_name4 - laser\_name5 - laser\_id1 - laser\_id2 - laser\_id3 - laser\_id4 - laser\_id5 - pmt\_voltage - dark\_type - live\_count - app\_name - flat\_field - GrayResponseData - GR\_Data Data Block 9 ~~~~~~~~~~~~ Actual data for Collection "Scan Header". See Data Block 8 for details on possible types of data. Data Block 10 ~~~~~~~~~~~~~ Only image data, no fields Image data in this block is only pixel data, organized starting from bottom-left of image to upper-right. The first bytes of this data define the pixels of the bottom row, from left to right. The next bytes are the second-to-bottom row from left to right, etc. All known images are little-endian, 16-bit grayscale. Although the metadata may define another format. (See e.g. 'Scan Header' -> 'SCN' -> {'endian', 'bytes\_per\_pix', 'data\_fmt' })